* fix: remap session JSONL chunk line numbers to original source positions
buildSessionEntry() flattens JSONL messages into plain text before
chunkMarkdown() assigns line numbers. The stored startLine/endLine
values therefore reference positions in the flattened text, not the
original JSONL file.
- Add lineMap to SessionFileEntry tracking which JSONL line each
extracted message came from
- Add remapChunkLines() to translate chunk positions back to original
JSONL lines after chunking
- Guard remap with source === "sessions" to prevent misapplication
- Include lineMap in content hash so existing sessions get re-indexed
Fixes#12044
* memory: dedupe session JSONL parsing
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Co-authored-by: Tak Hoffman <781889+Takhoffman@users.noreply.github.com>
Add a `paths` option to `memorySearch` config, allowing users to
explicitly specify additional directories or files to include in
memory search.
Follow-up to #2961 as suggested by @gumadeiras — instead of auto-following
symlinks (which has security implications), users can now explicitly
declare additional search paths.
- Add `memorySearch.paths` config option (array of strings)
- Paths can be absolute or relative (resolved from workspace)
- Directories are recursively scanned for `.md` files
- Single `.md` files can also be specified
- Paths from defaults and agent overrides are merged
- Added 4 test cases for listMemoryFiles
